NSCLC Radiogenomics-Stanford | NSCLC Radiogenomics: Initial Stanford Study of 26 Cases
DOI: 10.7937/K9/TCIA.2014.X7ONY6B1 | Data Citation Required | 41 Views | 6 Citations | Analysis Result
| Location | Subjects | Size | Updated | |||
|---|---|---|---|---|---|---|
| Non-small Cell Lung Cancer | Lung | 26 | Microarray | 2013/03/01 |
Summary
This subset of NSCLC Radiogenomics contains images from patients with non-small cell lung cancer (NSCLC) imaged prior to surgical excision with both thin-section computed tomography (CT) and whole body positron emissions tomography (PET)/CT scans acquired under Institutional Review Board approval from Stanford University and the Veterans Administration Palo Alto Health Care System. The first installment of 26 cases (see shared list “NSCLC Radiogenomics: Initial Stanford Study of 26 Cases”) corresponds to microarray data acquired from the excised samples, which is available on the National Center for Biotechnology Information (NCBI) Gene Expression Omnibus, where Digital Imaging and Communications in Medicine (DICOM) patient names are identical to microarray sample names. For scientific and other inquiries about this dataset, please contact TCIA’s Helpdesk.
Data Access
Version 1: Updated 2013/03/01
| Title | Data Type | Format | Access Points | Subjects | License | |||
|---|---|---|---|---|---|---|---|---|
| Images | SEG, CT, PT | DICOM | Download requires NBIA Data Retriever |
25 | 49 | 114 | 22,083 | CC BY 3.0 |
Additional Resources For This Dataset
The following external resources are not hosted or supported by TCIA, but may be useful to researchers utilizing this collection.
- Microarray Samples: http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE28827
Citations & Data Usage Policy
Data Citation Required: Users must abide by the TCIA Data Usage Policy and Restrictions. Attribution must include the following citation, including the Digital Object Identifier:
Data Citation |
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Napel, Sandy, & Plevritis, Sylvia K. (2014). NSCLC Radiogenomics: Initial Stanford Study of 26 Cases (NSCLC Radiogenomics-Stanford) [Data Set]. The Cancer Imaging Archive. http://doi.org/10.7937/K9/TCIA.2014.X7ONY6B1 |
Detailed Description
The original 26 cases referenced in this manuscript have been renamed. A list of the mapping between GSM-XXX Patient IDs and R01-XXX Patient IDs can be found here.
Related Publications
Publications by the Dataset Authors
The authors recommended the following as the best source of additional information about this dataset:
Publication Citation |
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Gevaert, O., Xu, J., Hoang, C. D., Leung, A. N., Xu, Y., Quon, A., … Plevritis, S. K. (2012, August). Non-Small Cell Lung Cancer: Identifying Prognostic Imaging Biomarkers by Leveraging Public Gene Expression Microarray Data -Methods and Preliminary Results. Radiology. Radiological Society of North America (RSNA). http://doi.org/10.1148/radiol.12111607 |
Research Community Publications
TCIA maintains a list of publications that leveraged this dataset. If you have a manuscript you’d like to add please contact TCIA’s Helpdesk.